Ads help keep PepDraw free for researchers worldwide. Please whitelist this site, or go ad-free with PepDraw Plus.
Generate structures and calculate properties for free. Upgrade to Plus for full chemistry control — stereochemistry, PTMs, batch processing, and structural output at $5/month.
Generate high-resolution peptide structures perfect for journal submissions, presentations, and educational materials. PNG export included free.
Accurate protonation states for all ionizable amino acids. Visualize your peptide at pH 1, 7, and 14 — or the full 0–14 continuous range with Plus.
Real-time molecular weight, pI, net charge, and hydrophobicity. Results update as you type using industry-standard scales.
Per-residue L/D stereochemistry, Pyrrolysine and Selenocysteine support, and phosphorylation (pSer, pThr, pTyr) and acetylation (acK). SVG, PDF, and JPG export included.
Calculate properties for up to 1,000 sequences at once. Export SMILES, InChI, MOL, and SDF for cheminformatics pipelines.
An interactive 3D viewer with PDB, mmCIF and SDF export. Aggregation and synthesis-difficulty filters, intrinsic solubility, estimated serum half-life and sequence indices — plus full HELM notation, the advanced PTM suite, cyclization and cross-links, batch analysis of up to 500,000 sequences, and image rendering and 3D structures for up to 10,000 per job. Up to 100 amino acids.
Coming soon. Academic $29/month · Commercial $79/month (founding rate $49/month). See plans →
SVG · PDF · JPG · Full pH range · L/D stereochemistry · PTMs · Batch processing · SMILES & InChI · Ad-free